AI in science, Quarto, biodiversity, changed grant titles, new papers &

Here we go again! I ran the Mainova Frankfurt Marathon 2025 and wanted to look at the race results. How can we do this using R? I couldn’t see an easy way to download the data, so I used R to scrape them.

Biopython 1.86 has been released and is available from our website and PyPI. This contains about nine months worth of updates, and is our first release with Python 3.14 support. See change-log in the news file (most of the changes are in Bio.Align and Bio.PDB). There have also been a few deprecations and removals of older code.

Polyglot data science pipeline (R+Python+Julia) with rixpress, EuroBioC2025/BCN, Python packaging for R devs, Python in 2025, R/Pharma, DARPA, ASHG, the R Data Scientist, Quarto, universities and AI

{width=“70%; class=”zoomable”; height:200px;“} The European Bioconductor conference 2025 (EuroBioC2025) took place between September 17 and 19, 2025, and was hosted at the Barcelona Biomedical Research Park (PRBB) in Barcelona by the Department of Medicine and Life Sciences of Universitat Pompeu Fabra (MELIS-UPF)and the Barcelona Institute for Global Health (ISGlobal). The Catalan capital boasts a rich culture, a lively atmosphere, and a blend

Moving from Google Docs to Word will break your Zotero citations/bibliography linkages unless you do this first.

Sponsoring BOSC Sponsorships from companies and non-profit organizations help to defray some of our costs and enable us to offer free registration for some conference participants. In 2024, thanks to our sponsors’ generous support, we were able to grant free registration to 15 participants, offer honoraria to keynote speakers, and cover other expenses. Interested in sponsoring BOSC? Please contact us at bosc@open-bio.org!

{width=“70%; class=”zoomable”; height:200px;“} The European Bioconductor conference 2025 (EuroBioC2025) took place between September 17 and 19, 2025, and was hosted at the Barcelona Biomedical Research Park (PRBB) in Barcelona by the Department of Medicine and Life Sciences of Universitat Pompeu Fabra (MELIS-UPF)and the Barcelona Institute for Global Health (ISGlobal). The Catalan capital boasts a rich culture, a lively atmosphere, and a blend

I recently had a use case at work (a LiteStar app) where I needed to write to two linked tables (see below) in a transaction in our PostgreSQL database.

Bioconductor on GPUs, tidyomics, Quarto 1.8, Anthropic red-teaming on AIxBio, PGS in the clinic, Shock Doctrine in genome engineering, GenAI for data viz with R, Datapalooza, 4 compact rejections

Quoting Claus Wilke