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Data driven blogging from the GigaScience editors
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TechnologyGenomicsGigaScienceGuest PostGWASBiological Sciences
Published

GigaScience recently published an article all about a Genotype Investigator for Genome-Wide Analyses, alternatively known as Gigwa. But what is this and how can it help? Guilhem Sempere explains more in a guest post. Exploring the structure of genomes and analyzing their evolution is essential to understanding the adaptation of organisms to biotic and abiotic environments.

BiologyBig DataGenomicsOpen DataOpen ScienceBiological Sciences
Published

Imagine you would like to study a plant species of interest, say for its ability to supply food, fiber, fuel or just to gain a deeper scientific understanding. Two approaches immediately come to mind: an understanding of its underlying genetics and an understanding of plant phenomics, which spans how the genes express themselves across huge length scales from the microscopic to the whole plant itself.

BiologyTechnologyGenomicProtocolsProtocols.ioBiological Sciences
Published

Schistocephalus solidus is as an emblematic study system in parasitology, first discovered by Peter Christian Abildgaard as far back as 1790, as having an extremely complicated life-cycle with multiple developmental states and host species (parasitizing crustaceans, fish and birds). Its fitting that such a classical model system has been used to showcase novel mechanisms of crediting and sharing research protocols in a reproducible

Open AccessPublishingTechnologyGenomicsMetagenomicsBiological Sciences
Published

** GigaScience has Tapeworms and Scabies! And Reproducible Research. **While there has been recent controversy (and hashtags in response) from some of the more conservative sections of the medical community calling those who use or build on previous data “research parasites”, as data publishers we strongly disagree with this.

BiologyBig DataBiodiversityData Intensive EcologyEcologyBiological Sciences
Published

The great responsibility Every discipline of science is unique.  Ecology is no exception.  We work in diverse, complex, context-dependent systems. Global change and anthropogenic influences are very real issues for the health of the planet that ecologists often examine.  As a discipline, we have moved from context-dependent, local studies to much larger, integrated studies.

BiologyTechnologyData PublicationImagingMicroCTBiological Sciences
Published

A new portrait of Obama shows a spineless, slimy, gutter dweller, and in GigaScience today we give you unprecedented insight into what makes them tick. Don’t worry, we haven’t encroached upon Fox News to provide partisan political commentary for the US elections, we are talking about the Obama genus of leaf-shaped Planerians from South America.

HealthMedicineBAWBig DataBrainBiological Sciences
Published

In support of Brain Awareness Week, we have asked Cameron Craddock, Director of the Computational NeuroImaging Lab, Nathan S. Kline Institute for Psychiatric Research and Director of Imaging, Child Mind Institute, to write a blog highlighting open science in neuroimaging, and to announce our upcoming publication of the 2015 Brainhack Proceedings and the Brainhack Thematic Series.

BiologyConferencesConGenConservationG10KBiological Sciences
Published

The use of “big data” genomics technologies may gather most attention and funding in “big money” settings such as healthcare and agriculture, but due to a precipitous drop in cost its use has become increasingly ubiquitous in all corners of biological research, including biodiversity research and conservation.

HealthDisease OutbreaksGuest PostInfectious DiseaseOpen DataBiological Sciences
Published

The current global panic about Zika is a “data gap“ issue: a vacuum of information due to gaps in understanding of its spread and pathogenesis, and gaps in sharing the research data and specimens that will enable the global research community to keep one step ahead of the disease spread.