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GigaBlog
Data driven blogging from the GigaScience editors
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Open AccessTechnologyUsegalaxyConferencesGalaxyBiological Sciences
Published

The upcoming 2014 Galaxy Community Conference (GCC2014) has just opened early registration, and following from our series announced at the last meeting we are renewing our call for papers for our special thematic focused series on studies utilizing large-scale datasets and workflows.

Open AccessPublishingCreative CommonsGenome AssemblyLicensingBiological Sciences
Published

We want you to use our stuff We get many queries regarding the policies and licenses associated with our content and supporting data, and as our co-publishers BioMed Central have just announced the migration of their licenses (including ours) to the newly released version 4.0 of the creative commons CC-BY attribution license, we thought it would be a good opportunity to clarify our policies in an easier to understand manner than

MedicineTechnologyGigaDBMetagenomicsMicrobiomeBiological Sciences
Published

Visualizations are becoming increasing important to graphically illustrate, understand, and glean insight from the explosion of larger and larger datasets in this supposed era of “big data”. Microbial ecology and the study of the microbiome is revolutionizing how we look at health, microorganism diversity and ecological interactions, but these studies are proving challenging to deal with the ever-expanding numbers of specimens sampled.

TechnologyConferencesFunction PredictionGigaScienceISMBBiological Sciences
Published

Editors: Mark Wass (University of Kent, UK), Iddo Friedberg (Miami University, Oxford, Ohio, USA), Predrag Radivojac (Indiana University, Bloomington, Indiana, USA) Last July, GigaScience and the organisers of the Automated Function Prediction special interest group at ISMB announced an upcoming series on Automated Function Prediction.

Open AccessTechnologyAsh DiebackBGIBioinformaticsBiological Sciences
Published

As the GigaScience journal moves from strength-to-strength, with that comes the expansion of the editorial and data management teams that are now spanning three continents – and what better way to meet than at the 8th International Conference on Genomics (ICG8) in Shenzhen, China, co-organised by the BGI and GigaScience. Held at the Thunderbirdsesque Vanke International Conference Centre in the popular seaside resort of

Open AccessEpigenomicsGigaDBMethylationNematodeBiological Sciences
Published

Depositing data in GigaDB helps authors win BMC Open Data Award by boosting confidence in unexpected research findings Last night at the Beyond the Genome conference in San Francisco, researchers were presented with this year’s BioMed Central Open Data Award for their work demonstrating that DNA methylation occurs in the parasitic worm Trichinella spiralis , a human pathogen also known as “pork worm” due to it being

TechnologyAssemblathonCompetitionsGenome AssemblyGenomicsBiological Sciences
Published

A lot has already been written about last months Assemblathon2 paper in GigaScience (see the growing list of articles here), but for the box-set completists interested in squeezing every last bit of insight into the project and how it was put together, there was a lot of additional material left over from the recent Biome Q&A with Keith Bradnam that we thought it could be useful to post in a (hopefully final) blog posting.