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iPhylo

Rants, raves (and occasionally considered opinions) on phyloinformatics, taxonomy, and biodiversity informatics. For more ranty and less considered opinions, see my Twitter feed.ISSN 2051-8188. Written content on this site is licensed under a Creative Commons Attribution 4.0 International license.
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Published

This is guest post by Angelique Hjarding in response to discussion on this blog about the paper below. Thank you for highlighting our recent publication and for the very interesting comments. We wanted to take the opportunity to address some of the issues brought up in both your review and from reader comments. One of the most important issues that has been raised is the sharing of cleaned and vetted datasets.

Published

If we view biodiversity data as part of the "biodiversity knowledge graph" then specimens are a fairly central feature of that graph. I'm looking at ways to link specimens to sequences, taxa, publications, etc., and doing this across multiple data providers. Here are some rough notes on trying to model this in a simple way.

Published

I stumbled across this paper (found on the GBIF Public Library): The first sentence of the abstract makes the paper sound a bit of a slog to read, but actually it's a great fun, full of pithy comments on the state of digital humanities. Almost all of this is highly relevant to mobilising natural history data.

Published

I've been involved in a few Twitter exchanges about the upcoming pro-iBiosphere meeting regarding the "Open Biodiversity Knowledge Management System (OBKMS)", which is the topic of the meeting. Because for the life of me I can't find an explanation of what "Open Biodiversity Knowledge Management System" is, other than vague generalities and appeals to the magic pixie dust that is "Linked Open Data" and "RDF", I've been grumbling away on Twitter.