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Henry Rzepa's Blog

Henry Rzepa's Blog
Chemistry with a twist
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EliminationMigrationPericyclicReaction MechanismTutorial MaterialChemieEnglisch
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The Curtius reaction is represented in most chemistry texts and notes as following path (a) below. It is one of a general class of thermally induced rearrangement which might be described as elimination/migration (in a sense similar to this ring contraction migration/elimination), in this case implicating a nitrene intermediate if the two steps occur consecutively.

Curly ArrowsDeficiencyIntrinsic Reaction CoordinateReaction MechanismTutorial MaterialChemieEnglisch
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Two years ago, I discussed how curly arrow pushing is taught, presenting four different ways of showing the arrows. One of the comments posted to that blog suggested that all of the schemes shown below were deficient in one aspect.

Dimer ProductIPadPericyclicPostscriptPotential Energy SurfaceChemieEnglisch
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organic chemistry. It does not look like much, but this small little molecule brought us ferrocene, fluxional NMR, aromatic anions and valley-ridge inflexion points. You might not have heard of this last one, but in fact I mentioned the phenomenon in my post on nitrosobenzene. As for being at a crossroads, more like a Y-junction.

Curly ArrowsInteresting ChemistryFree Energy Activation BarrierHistoricalΣ/π OrthogonalityChemieEnglisch
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Recollect, Robinson was trying to explain why the nitroso group appears to be an o/p director of aromatic electrophilic substitution. Using σ/π orthogonality, I suggested that the (first ever) curly arrows as he drew them could not be the complete story, and that a transition state analysis would be needed. Here it is.

Chemical ITDigital Eco-systemsInChI StringIPadIPhoneChemieEnglisch
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A month or so ago at a workshop I was attending, a speaker included in his introductory slide a QR (Quick Response) Code. It is a feature of most digital eco-systems that there is probably already “an app for it”. So I thought I would jump on the band wagon by coding an InChI string.

Chemical ITAPIChemspiderComputational ChemistryDigital RespositoryChemieEnglisch
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I blogged about this two years ago and thought a brief update might be in order now. To support the discussions here, I often perform calculations, and most of these are then deposited into a DSpace digital repository, along with metadata.

Curly ArrowsDimerReaction MechanismTutorial MaterialChemieEnglisch
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Little did I imagine, when I discovered the original example of using curly arrows to express mechanism, that the molecule described there might be rather too anarchic to use in my introductory tutorials on organic chemistry. Why? It simply breaks the (it has to be said to some extent informal) rules!