Postagens de Rogue Scholar

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BIOinformaciónCursosBiologiaInglês
Publicados in BIOgarabatos

Durante el semestre 2026-1 existe la opción de tomar el curso que impartiré en la carrera de Matemáticas Aplicadas de la Facultad de Ciencias de la UNAM. Modalidad: virtual Material : computadora o laptop, cámara, micrófono e internet Día y hora : Lu-Vi 18:00 a 19:00 hrs Asistencia : 90% indispensableCaracterísticas: Curso activo enfocado en la investigación y el uso de bioinformación, bioliteratura y biodatos.

NewsResearch-softwareCiências da Computação e da InformaçãoInglês
Publicados in Abhishek Tiwari

Every so often, we get a chance to look back at our past work. Sometimes it’s with a cringe, sometimes with nostalgia, and occasionally, with an opportunity to rebuild. During a recent and much-needed time off, I found myself embarking on a project that was a blend of all three: a complete, ground-up rewrite of the Hydrogen Bond Analysis Tool (HBAT), a piece of software I first wrote nearly two decades ago.

BiologiaInglês
Publicados in Paired Ends

I originally wrote and published this essay at The Connected Ideas Project, an excellent newsletter by my good friend and colleague Alexander Titus. If you’re not reading TCIP you’re missing out. After I finished my postdoc I was faculty in academia for eight years before moving to a consulting firm for five years, then joined a biotech startup two years ago.

Human AnatomyNervous SystemTutorialCiências da Terra e do AmbienteInglês
Publicados in Sauropod Vertebra Picture of the Week

Click to embiggen White rami are usually thicker than gray rami, and sometimes they are visibly different in color, but they are always the more lateral connections between the sympathetic chain and the intercostal nerves, and the ones you’ll see first when you peel off the parietal pleura. You may even see the white rami through the parietal pleura if it’s thin enough.

CurationOpenscienceNmrshiftdbQuímicaInglês
Publicados in chem-bla-ics

Depending on your exact definition of doing science, keeping track as precise as possible of your observations is an essential part of doing science. The precision should be high enough that mistakes are obvious. This pattern is, of course, not limited to doing science and we see this in open source development too. Unfortunately, in the modern way of doing science, this is not getting the attention it should get.

UropCiências da Computação e da InformaçãoInglês
Publicados in Anil Madhavapeddy's feed

The exam marking is over, and a glorious Cambridge summer awaits! This year, we have a sizeable cohort of undergraduate and graduate interns joining us from next week. This note serves as a point of coordination to keep track of what's going on, and I'll update it as we get ourselves organised.

PapersBiologiaInglês
Publicados in Paired Ends

This week’s recap highlights the new Datavzrd tool for interactive visualization and communication of tabular data (I’m genuinely really looking forward to trying this one), tracing the shared foundations of gene expression and chromatin structure, PISA for visualizing cis-regulatory rules in genomic data, fast protein structure searching using structure graph embeddings, and a review/perspective on intrinsically disordered regions as

Rogue ScholarOpen InfrastructureCiências da Computação e da InformaçãoInglês
Publicados in Front Matter

InvenioRDM is the open source turn-key research data management platform, with detailed documentation available here. InvenioRDM Starter facilitates deployment and configuration of InvenioRDM, allowing you to run InvenioRDM on your local computer within 15 min. This is achieved by providing a) a prebuilt Invenio-App-RDM Docker image, and b) a Docker Compose configuration file with sensible defaults.

ForschungsbewertungForschungsinformationImpactMetricsOpen AccessOutras ciências sociaisAlemão
Publicados in pulse49.com
Autor Ulrich Herb

Am 26. Juni 2025 durfte ich an der Fachhochschule Münster über ein Thema sprechen, das vielen Wissenschaftler*innen unter den Nägeln brennt: Wie publiziere ich sinnvoll, sichtbar und nachhaltig? In meinem Vortrag „Publikationsstrategien für Wissenschaftler*innen“ ging es unter anderem um: Warum überhaupt publizieren? Zwischen Publish or Perish und echter Wissenschaftskommunikation: Reputation, Karrierewege