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Dr. Joaquin Barroso's Blog

Scientific log of a computational chemist - "Make like a molecule and React!"
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ChemosensorsComputational ChemistryPaperSensorsRealTimeChemCarnivalKimya Bilimleriİngilizce
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A new publication is now available in which we calculated the binding properties of a fluorescent water-soluble chemosensor for halides which is specially sensitive for chloride. Once again, we were working in collaboration with an experimental group who is currently involved in developing all kinds of sustainable chemosensors.

ArticlesPublicationsSpectroscopyComputational ChemistryRamanKimya Bilimleriİngilizce
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Computing spectroscopic features of molecules is always an interesting challenge, specially when intermolecular contacts are into play. Take vibrational spectroscopy for instance, all the non-covalent interactions present in a solid will have an important effect on the the calculated frequencies and their intensities. However calculating the spectroscopical properties of a solid quickly becomes a daunting task.

AlumniCalixarenesCCIQSComputational ChemistryDrug DeliveryKimya Bilimleriİngilizce
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It is with great pleasure that I announce the graduation of another member of our research group: Luis Enrique “Kike” Aguilar defended his BSc thesis yesterday and is now counting the days left for the Autumn when he’ll move to the Netherlands for a masters in computational chemistry.

GaussianGaussViewWhite PapersVisualizationVisualization SoftwareKimya Bilimleriİngilizce
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Editing large molecules on a seemingly simple visualizer as GaussView can be a bit daunting. I’m working on a follow up of that project we recently published in JACS but now we require to attach two macrocycles to the organometallic moiety; the only caveat is that this time we don’t have any crystallographic data with which to start.

CCIQSEquipmentIQUNAMCompressorNitrogenKimya Bilimleriİngilizce
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Well, the title of this post is pretty self-explanatory as well as unrelated to computational chemistry. Yesterday here at CCIQS we received new equipment for supplying liquid nitrogen to our laboratories, especially to the NMR machines which consume it a lot, and also for the X-ray diffractometers which require cooling of crystals. This new compressor replaces the old one which has long overseen its useful life.

PublicationsRandom ThoughtsScoopKimya Bilimleriİngilizce
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It was your idea. You had it. Or did it have you? But suddenly, you see it wrapped around someone else’s words. You read and gasp in denying shock. This can’t be! You read again trying to find your mistake, it is clearly a mistake on your part; to find it, you search for differences, preferably major ones that reveal that the identity of this idea is different to yours. You hope to just be mistaking it for yours.

HumorRandom ThoughtsTheoretical ChemistryBosonsExclusion PrincipleKimya Bilimleriİngilizce
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Pauli’s Exclusion Principle is a paramount concept in Quantum Mechanics which has implications from statistical mechanics to quantum chemistry, consequently, there are many different statements to summarize it depending on the forum. I occasionally joke with my students about how we learnt it in kindergarten an how we state it now at the end of our computational chemistry course.

ArticlesFluorescenceFluorescence QuenchingPaperRealTimeChemCarnivalKimya Bilimleriİngilizce
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As we approach to the end of another year, and with that the time where my office becomes covered with post-it notes so as to find my way back into work after the holidays, we celebrate another paper published!

AlumniComputational ChemistryTheoretical ChemistryChemistryGP120Kimya Bilimleriİngilizce
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It is with great pleasure that I’d like to announce the thesis defense of Guillermo “ Memo ” Caballero and Howard Diaz who in past days became the second and third students, respectively, to get their B.Sc. degrees with theses completed at our lab.