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rOpenSci - open tools for open science

rOpenSci - open tools for open science
Open Tools and R Packages for Open Science
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RodevSoftware Peer ReviewTech NotesBilgisayar ve Bilişim Bilimleriİngilizce
Yayınlandı
Yazar Maëlle Salmon

We strive for high quality in our suite of packages, in practice via a system of software peer review, and via packaging guidelines that keep growing. There is therefore a risk of increasing the workload of package authors, who already have a lot on their plate. To avoid that, when explaining how to do things in our dev guide, we recommend existing automated tools to authors.

Software Peer ReviewDev GuideBilgisayar ve Bilişim Bilimleriİngilizce
Yayınlandı
Yazarlar Maëlle Salmon, Brooke Anderson, Scott Chamberlain, Anna Krystalli, Lincoln Mullen, Karthik Ram, Noam Ross, Melina Vidoni

As announced in our recent post about updates to our Software Peer Review system, all our package development, review and maintenance is available as an online book. Our goal is to update it approximately quarterly so it’s already time to present its second official version!

PackagesData AccessDataWeatherClimateBilgisayar ve Bilişim Bilimleriİngilizce
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Yazar Adam Sparks

NASA generates and provides heaps of data to the scientific community. Not allof it is looking out at the stars. Some of it is looking back at us here onEarth. NASA’s Earth science program observes, understands and models theEarth system 1 . We can use these data to discover how our Earth is changing,to better predict change, and to understand the consequences for life on Earth.

Software Peer ReviewInternational TradeTradestatisticsData AccessReproducibilityBilgisayar ve Bilişim Bilimleriİngilizce
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Yazar Mauricio Vargas Sepúlveda

Introduction Open Trade Statistics (OTS) was created with the intention to lower the barrier to working with international economic trade data. It includes a public API, a dashboard, and an R package for data retrieval.

Software Peer ReviewSoftwarePackagesQualtRicsData AccessBilgisayar ve Bilişim Bilimleriİngilizce
Yayınlandı
Yazar Julia Silge

rOpenSci is one of the first organizations in the R community I ever interacted with, when I participated in the 2016 rOpenSci unconf. I have since reviewed several rOpenSci packages and been so happy to be connected to this community, but I have never submitted or maintained a package myself. All that changed when I heard the call for a new maintainer for the qualtRics package. “IT’S GO TIME,” I thought.

PdfPackagesTech NotesBilgisayar ve Bilişim Bilimleriİngilizce
Yayınlandı
Yazar Jeroen Ooms

Last month we released a new version of pdftools and a new companion package qpdf for working with pdf files in R. This release introduces the ability to perform pdf transformations, such as splitting and combining pages from multiple files. Moreover, the pdf_data() function which was introduced in pdftools 2.0 is now available on all major systems.Split and Join PDF files It is now possible to split, join, and compress pdf files with pdftools.

CommunitySoftware Peer ReviewSoftwarePavoMethods In Ecology And EvolutionBilgisayar ve Bilişim Bilimleriİngilizce
Yayınlandı
Yazarlar Stefanie Butland, Nick Golding, Chris Grieves, Hugo Gruson, Thomas White, Hao Ye

Stefanie Butland, rOpenSci Community Manager Some things are just irresistible to a community manager – PhD student Hugo Gruson’s recent tweets definitely fall into that category.

CommunityEventsCommunity CallSecurityRopsecBilgisayar ve Bilişim Bilimleriİngilizce
Yayınlandı
Yazarlar Stefanie Butland, Ildi Czeller, Bob Rudis

“Security” can be a daunting, scary, and (frankly) quite often a very boring topic. BUT!, we promise that this Community Call on May 7th will be informative, engaging, and enlightening (or, at least not boring)! Applying security best practices is essential not only for developers or sensitive data storage but also for the everyday R user installing R packages, contributing to open source, working with APIs or remote servers.

HydrologyCRANBomrangClifroDbhydroRBilgisayar ve Bilişim Bilimleriİngilizce
Yayınlandı
Yazarlar Sam Albers, Ilaria Prosdocimi, Sam Zipper

Importance of Hydrology Given that liquid water is essential to life on Earth, water research cuts across numerous disciplines including hydrology, meteorology, geography, climate science, engineering, ecology, and more. Numerous R packages have emerged from this diversity of approaches, and we recently gathered many of them into a new rOpenSci task view which we broadly titled ‘Hydrology’ and published to CRAN.

PackagesDrakeReproducibilityTech NotesBilgisayar ve Bilişim Bilimleriİngilizce
Yayınlandı
Yazar Will Landau

Version 7.0.0 of drake just arrived on CRAN, and it is faster and easier to use than previous releases.install.packages("drake")Recap Data analysis can be slow. A round of scientific computation can take several minutes, hours, or even days to complete. After it finishes, if you update your code or data, your hard-earned results may no longer be valid. How much of that valuable output can you keep, and how much do you need to update?