If you've ever had trouble getting started doing a data analysis, you are certainly not alone. Should I run an ANOVA, MANOVA, ANCOVA, or MANCOVA? Should that have been a McNemar's test, a Kruskal-Wallis, or a Mann-Whitney U?To at least pin down the statistical test you should run, consult these excellent flowcharts by Marylyn Ritchie, Jason Moore, and Tricia Thornton-Wells.

Many of you have used this before, but for those who haven't, SNPper is a convenient little web application for quickly annotating results. So you've done your association analysis and have a list of rs-numbers you'd like to quickly get more information about.

Last week I posted a one-page reference guide that gives a short description of the Linux commands I most commonly use. To accompany this, here is a detailed walkthrough filled with examples that will introduce any beginner to the basics of using Linux in just a few hours.

Whenever we have new students rotating through our lab who've never used Linux I always end up scrounging around the world wide series-of-tubes only to find some command line reference that's not really useful for students. So I made my own one-page reference guide that gives a basic description of most of the commands most of you will use. Feel free to distribute.

As Stephen nicely posted earlier, RSS feeds are a very powerful way to keep up with the literature -- they "push" the information to you. In addition to subscribing to individual journals, you can subscribe to a PubMed search! This will let you keep up with ALL PubMed indexed journals.To subscribe to a PubMed search, first go to www.pubmed.org and enter your search terms.

RSS rocks. In addition to consolidating all the news you read on a single page, it's also handy for keeping up with the latest publications in your favorite journals without ever going to PubMed. If you're not using RSS, give it a shot and you'll never look back.RSS stands for Really Simple Syndication.

Welcome!You've reached the first official post of Getting Genetics Done. The idea for this blog was a spin off of the short courses and workshops that Vanderbilt's Computational Genomics Core has recently been offering. Our goal for writing this is to share anything we use or hear of that makes life easier in genetics research, or boosts productivity throughout the workday in general.