BOSC 2019 will be part of ISMB 2019 Every year until 2018, BOSC was part of the annual ISMB conference as a community of special interest (COSI, formerly known as a SIG, Special Interest Group). As part of our continuing quest to broaden and deepen the BOSC community, we decided to perform an experiment this year by partnering with the Galaxy Community Conference rather than with ISMB.
This year, the Galaxy Community Conference (GCC) and the Bioinformatics Community Conference (BOSC) met together to form the first Bioinformatics Community Conference. At GCCBOSC 2018, participants were able to meet and collaborate with a broad community of bioinformatics developers and users who focus on open, interoperable software tools and libraries that facilitate scientific research.
It was really great to meet so many of you at GCCBOSC this year! We will soon have a couple of Travel Fellowship blog posts talking about the conference, so we won’t provide too much of a general overview at this point, but we would like to share a little more about one of the Bird of Feather (BoF) events we ran - specifically the OBF community BoF.
Dear Biopythoneers, I’m writing this in Portland at the GCC BOSC 2018 conference, where I will present the Biopython Project Update 2018 talk tomorrow.
If you’re going to GCCBOSC 2018, we invite you to join us at the OBF Birds of a Feather on Wednesday, June 27, from 5:40-7:40pm. Come and chat over dinner! Everyone is invited, whether you’re a longtime OBF member or someone who’s never even heard of the OBF.
We had another great round of applications for the OBF Travel Fellowship this spring. After reviewing the applications, the OBF Board selected three recipients, who have all accepted the award. Congratulations to our spring 2018 recipients: Anisha Keshavan –
This is a guest blog post from Anisha Keshavan, who was supported by the ongoing Open Bioinformatics Foundation travel fellowship program to attend the 2018 eLife Innovation Sprint in Cambridge, May 2018. The OBF’s Travel Fellowship program continues to help open source bioinformatics software developers with funding to attend conferences or workshops. This was one of three awards from our April 2018 travel fellowships call.
The Open Bioinformatics Foundation is again participating in the Google Summer of Code program this year. Last Monday the selected students were announced. Congratulations to all of you, and a heartfelt welcome. I also want to use this opportunity to thank all students who applied. Resources were limited, we did not get all the slots that we asked for, and so we had to make some tough choices.
BioJava 5.0.0 was released on the 23rd of March 2018. This represents a major milestone that brings more consolidation and reorganisation of modules. This is the first release to be based on Java 8, bring in your lambdas and stream API calls! The release represents work done in the last 2 years, alpha releases were available for quite some time and now this makes all the changes officially public.
Dear Biopythoneers, Source distributions of Biopython 1.71 are now available from the downloads page on the official Biopython website, and the release is also on the Python Package Index (PyPI) including pre-compiled Wheel Packages for Linux, Mac OS X and Windows.
As mentioned in our previous blog post, last Friday the OBF had a board of directors meeting. One of the notable meeting items this time was to elect more board members to help be involved with the community. We’re pleased to announce that both candidates, Bastian Greshake Tzovaras and Yo Yehudi, were unanimously voted in by the other board members!Logically, one of their first moves as newly minted members was to draft this blog post!