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rOpenSci - open tools for open science

rOpenSci - open tools for open science
Open Tools and R Packages for Open Science
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GeospatialParzerSoftware Peer ReviewTech NotesInformática y Ciencias de la InformaciónInglés
Publicado
Autor Scott Chamberlain

parzer is a new package for handling messy geographic coordinates.The first version is now on CRAN, with binaries coming soon hopefully (seenote about installation below). The package recently completed rOpenScireview. 🔗parzer motivation The idea for this package started with a tweet from Noam Ross(https://twitter.com/noamross/status/1070733367522590721) about 15 months ago.

GitHubGitHub ActionsContinuous IntegrationSoftware-peer-reviewTicInformática y Ciencias de la InformaciónInglés
Publicado

“Continuous Integration” (CI) has become a standard for proper software development.Checking the integrity of software after changes have been made is essential to ensure its proper functionality.Also, CI helps catch problems introduced by dependencies early when executed on a regular basis (usually done via scheduled CRON runs). Multiple professional providers exist (Travis CI, AppVeyor CI, Circle CI, etc.) which offer CI services to the

Community CallEventsPackagesDevelopmentMaintenanceInformática y Ciencias de la InformaciónInglés
Publicado

For this Community Call, we’re trying something different. We’ll start with a short talk by Julia Silge , then spend most of the time on Q & A with four panelists - Elin Waring , Erin Grand , Leonardo Collado-Torres , and Scott Chamberlain - moderated by Julia. Our panelists bring a wide range of perspectives so there’s something for everyone.

PackagesTransportSpatialGeospatialRoutingInformática y Ciencias de la InformaciónInglés
Publicado
Autor Malcolm Morgan

With services like Google Maps, finding the fastest route from A to B has become quick, cheap, and easy. Not just for driving but walking, cycling and public transport too. But in the field of transport studies, we often want not only a single route, but thousands or millions of routes.

CommunityUnconfUnconf15WelcomeInformática y Ciencias de la InformaciónInglés
Publicado
Autor Julia Stewart Lowndes

At their closing keynote at the 2020 RStudio Conference, Hilary Parker and Roger Peng mentioned that they hatched the idea for their excellent Not So Standard Deviations podcast following their reunion at the 2015 rOpenSci unconf, (“runconf15”). That statement went straight to my heart because it pin-pointed how I had been feeling throughout the week of RStudio Conference that I had been unable to name.

NewsletterTaxadbRcleanOsfrCreventsInformática y Ciencias de la InformaciónInglés
Publicado

🔗rOpenSci HQ On behalf of rOpenSci, thank you to everyone who has contributed their creativity, curiosity, smarts, and time in the last year. Read our Thank You, 2019. 🔗Software Peer Review 3 community-contributed packages passed software peer review. osfr - R Interface to OSF. Author: Aaron Wolen; Reviewers: Heidi Seibold, Carl Boettiger;

Software Peer ReviewCommunityTaxadbData-accessData-extractionInformática y Ciencias de la InformaciónInglés
Publicado
Autor Kari Norman

Dealing with taxonomic inconsistencies within and across datasets is a fundamental challenge of ecology and evolutionary biology. Accounting for species synonyms, taxa splitting and unification is especially important as aggregation of data across time and different data sources becomes increasingly common.

CommunityOzunconfUnconfOzunconf19Informática y Ciencias de la InformaciónInglés
Publicado
Autor Steph Stammel

It was the best of times, it was the worst of times. Dickens might have meant it figuratively, but in the case of the rOpenSci OzUnconf 2019, we mean it literally. Set to the backdrop of a national emergency that is still ongoing from 11-13 December, our participants came from across Australia as well as New Zealand, Japan, India and Indonesia.

DocsPackagesAudioAvTech NotesInformática y Ciencias de la InformaciónInglés
Publicado

The latest version of the rOpenSci av package includes some useful new tools for working with audio data. We have added functions for reading, cutting, converting, transforming, and plotting audio data in any popular audio / video format (mp3, mkv, aac, etc). The functionality can either be used by itself, or to prepare audio data for further analysis in R using other packages.

Software Peer ReviewCommunitySoftwarePackagesPhylogenyInformática y Ciencias de la InformaciónInglés
Publicado

babette 1 is a package to work with BEAST2 2 ,a software platform for Bayesian evolutionary analysis from R. babette is a spin-off of my own academic research.As a PhD I work on models of diversification: mathematical descriptionsof how species form new species.

CommunityCode Of ConductGovernanceInformática y Ciencias de la InformaciónInglés
Publicado
Autores Stefanie Butland, Scott Chamberlain, Kara Woo

In January 2019, we announced the release of rOpenSci’s Code of Conduct version 2.0. This includes a named Committee, greater detail about unacceptable behaviors, instructions on how to make a report, and information on how reports are handled. We are committed to transparency with our community while upholding of victims and people who report incidents.