Messages de Rogue Scholar

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NewsResearch-softwareInformatique et sciences de l'informationAnglais
Publié in Abhishek Tiwari

Every so often, we get a chance to look back at our past work. Sometimes it’s with a cringe, sometimes with nostalgia, and occasionally, with an opportunity to rebuild. During a recent and much-needed time off, I found myself embarking on a project that was a blend of all three: a complete, ground-up rewrite of the Hydrogen Bond Analysis Tool (HBAT), a piece of software I first wrote nearly two decades ago.

BiologieAnglais
Publié in Paired Ends

I originally wrote and published this essay at The Connected Ideas Project, an excellent newsletter by my good friend and colleague Alexander Titus. If you’re not reading TCIP you’re missing out. After I finished my postdoc I was faculty in academia for eight years before moving to a consulting firm for five years, then joined a biotech startup two years ago.

Human AnatomyNervous SystemTutorialSciences de la terre et de l'environnementAnglais

White rami are usually thicker than gray rami, and sometimes they are visibly different in color, but they are always the more lateral connections between the sympathetic chain and the intercostal nerves, and the ones you’ll see first when you peel off the parietal pleura.

Philosophie, éthique et sciences des religionsAnglais

Rainer Maria Rilke, Letters to a Young Poet : - Milan Kundera, The Art of the Novel : - Walter Benjamin, The Storyteller : - Osip Mandelstam, ‘The 19th century’: - Georg Lukacs, Preface to The Theory of Novel : - Friedrich Nietzsche, Twilight of the Idols : - Robert Musil, The Man Without Qualities : The Ox and His Herdsman , 十牛図〈八〉人牛倶忘 :

CurationOpenscienceChimieAnglais
Publié in chem-bla-ics

Depending on your exact definition of doing science, keeping track as precise as possible of your observations is an essential part of doing science. The precision should be high enough that mistakes are obvious. This pattern is, of course, not limited to doing science and we see this in open source development too. Unfortunately, in the modern way of doing science, this is not getting the attention it should get.

PapersBiologieAnglais
Publié in Paired Ends

This week’s recap highlights the new Datavzrd tool for interactive visualization and communication of tabular data (I’m genuinely really looking forward to trying this one), tracing the shared foundations of gene expression and chromatin structure, PISA for visualizing cis-regulatory rules in genomic data, fast protein structure searching using structure graph embeddings, and a review/perspective on intrinsically disordered regions as

Rogue ScholarOpen InfrastructureInformatique et sciences de l'informationAnglais
Publié in Front Matter

InvenioRDM is the open source turn-key research data management platform, with detailed documentation available here. InvenioRDM Starter facilitates deployment and configuration of InvenioRDM, allowing you to run InvenioRDM on your local computer within 15 min. This is achieved by providing a) a prebuilt Invenio-App-RDM Docker image, and b) a Docker Compose configuration file with sensible defaults.

ForschungsbewertungForschungsinformationImpactMetricsOpen AccessAutres sciences socialesAllemand
Publié in pulse49.com
Auteur Ulrich Herb

Am 26. Juni 2025 durfte ich an der Fachhochschule Münster über ein Thema sprechen, das vielen Wissenschaftler*innen unter den Nägeln brennt: Wie publiziere ich sinnvoll, sichtbar und nachhaltig? In meinem Vortrag „Publikationsstrategien für Wissenschaftler*innen“ ging es unter anderem um: Warum überhaupt publizieren? Zwischen Publish or Perish und echter Wissenschaftskommunikation: Reputation, Karrierewege

BlogsSciences des médias et de la communicationAnglais
Publié in CST Online
Auteur Richard Wallis and Christa van Raalte

Richard Wallis and Christa van Raalte argue for greater honesty and pragmatism in addressing the talent pipeline. The prominence of the creative industries in the UK government’s industrial strategy as one of eight growth sectors to be prioritised will be welcomed by most of us involved in screen education. It is as yet unclear, however, how the proclaimed undertaking to develop an appropriately skilled workforce will manifest itself.