In this tutorial, we shall prepare a figure using DensToolKitViewer 2.1.0 (or later) to select the viewing angle of the molecule, for whenever the default view isn’t the optimal viewpoint or to get various for comparison.

Die EU und ihre Mitgliedstaaten erlebten im Sommer 2015 den bis dahin größten Zuzug von Flüchtenden ihrer Geschichte. Lösungsansätze, die diese Herausforderung auf Basis des Solidaritätsprinzips mit einer möglichst fairen Verteilung der Verantwortlichkeiten innerhalb der EU angehen sollten, waren nicht umsetzbar.

This month’s news includes: Research software community news, including Understanding Critical Software for UKRI Digital Research Infrastructure Funding opportunities, including the 2026 BSSw Fellowship Program Nominations open for Research Software Community Leadership Forum (CLF) Opportunities to get involved with community initiatives, including Software Heritage’s OSPO-RADAR survey Resources Community events, including EOSC Symposium 2025

I’ve recently submitted an article to the Journal of Open Source Software (JOSS) describing chembl-downloader, a Python package for automating downloading and using ChEMBL data in a reproducible way. In this post, I use chembl-downloader to show how the number of compounds, assays, activities, and other entities in ChEMBL have changed over time.

In my last blog post for Upstream, I noted that there were some potential issues with, and good alternatives to, the NIH plan to cap grant spending on article processing charges. One of my suggestions was that the NIH put its plan out for public comment so they could draw from community input in their final policy. Thankfully, the NIH did just that and the public can submit comments on the plan until 15 September 2025.

De 25/08 a 29/08 de 2025 acontece a IX Semana das Psicologias da UFF – IHS – RPS. O realce em “das Psicologias” atesta não apenas a diversidade e riqueza das psicologias, mas sobretudo...

DOI: 10.60804/hcfm-jx07 The majority of research activities involve creating, collecting, or using data. While datasets constitute the backbone of research activities, they are currently sidelined as part of research evaluation frameworks which predominantly focus on article publications.

I saw this Tweet a few days ago from Jeremy Leipzig counting the number of GitHub repositories that sequencing-related companies have on their organization page, but was immediately curious how many of these had an open-source license versus a restrictive or unknown license. I tried to one-shot this with GPT-5 given a screenshot of Jeremy’s Tweet and a few instructions. It got me 90% of the way but I had to make a few tweaks here and there.

How specialized AI models are rewriting the code of cell identity and accelerating regenerative biology

By the end of my PhD, I was somewhat disillusioned by the way scientific research worked and decided to pick a field that could open up a (small) door to industry, if I ever decided to take that route one day. (I was very naive about that, but that is a story for another time.) After some digging, I could find two labs focusing on the relatively narrow question I wanted to pursue for my postdoc.

In his 1975–76 lecture series at the Collège de France, Michel Foucault famously declared, ‘Society must be  defended’. While framed within the context of biopolitics and the genealogy of state violence, this provocation has found renewed relevance in the 21st century as new forms of warfare emerge. Today, the greatest threats ... The post Society Must Be Defended!